molecular formula C32H45N3O4S B1663628 Nelfinavir CAS No. 159989-64-7

Nelfinavir

Cat. No.: B1663628
CAS No.: 159989-64-7
M. Wt: 567.8 g/mol
InChI Key: QAGYKUNXZHXKMR-HKWSIXNMSA-N
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Scientific Research Applications

Antiviral Applications

HIV Treatment
Nelfinavir is primarily known as an HIV protease inhibitor, playing a crucial role in highly active antiretroviral therapy (HAART). It works by inhibiting the HIV protease enzyme, which is essential for the maturation of infectious viral particles. This action effectively reduces viral load in patients and improves immune function.

Oncological Applications

This compound has demonstrated significant antitumor effects across various cancer types through multiple mechanisms:

2.1 Mechanisms of Action

  • Inhibition of Signaling Pathways : this compound suppresses the Akt signaling pathway, which is often dysregulated in cancer cells. By inhibiting this pathway, this compound induces apoptosis and impairs cell proliferation in several cancer types, including small-cell lung cancer (SCLC) and castration-resistant prostate cancer (CRPC) .
  • Induction of Unfolded Protein Response (UPR) : In SCLC cells, this compound triggers UPR, leading to cell death. This response is linked to the inhibition of mTOR activation and reduced expression of oncogenic markers like achaete-scute homolog 1 (ASCL1) .

2.2 Case Studies and Clinical Trials

  • Small-Cell Lung Cancer : In vitro studies have shown that this compound effectively inhibits SCLC cell proliferation and induces apoptosis at concentrations as low as 10 μM . In vivo experiments with patient-derived xenograft (PDX) models confirmed its efficacy in reducing tumor growth.
  • Castration-Resistant Prostate Cancer : this compound has been identified as a potent inhibitor of S2P cleavage, a process vital for CRPC proliferation. This inhibition leads to increased ER stress and accumulation of inactive precursors of key transcription factors . Clinical trials are being proposed to further explore its therapeutic potential in this context.

Repurposing for Other Diseases

Recent studies suggest that this compound may be effective against other infectious diseases:

  • Helminth Infections : A study indicated that this compound shows promise in treating echinococcosis caused by Echinococcus multilocularis. Its repurposing could provide a single-drug therapy option for patients co-infected with HIV and helminths .

Pharmacokinetics and Safety Profile

This compound's pharmacokinetics have been extensively studied to optimize dosing regimens in HIV-infected populations. Variability in drug metabolism can influence therapeutic outcomes, necessitating careful monitoring during treatment .

Summary Table of this compound Applications

Application AreaMechanism of ActionEvidence/Case Studies
HIV Treatment Inhibition of HIV proteaseStandard component of HAART
Small-Cell Lung Cancer Induction of UPR; inhibition of mTOREffective in vitro and in vivo studies
Castration-Resistant Prostate Cancer Inhibition of S2P cleavageProposed for clinical trials based on preclinical data
Echinococcosis Treatment Antiparasitic effectsPromising results from drug repurposing studies

Biological Activity

Nelfinavir, an HIV protease inhibitor, has garnered attention not only for its antiviral properties but also for its potential anticancer activity. This article explores the biological activity of this compound, detailing its mechanisms of action, clinical applications, and research findings.

This compound exhibits multiple mechanisms that contribute to its biological activity:

  • Proteasome Inhibition : this compound inhibits proteasome activity, leading to the accumulation of misfolded proteins and inducing endoplasmic reticulum (ER) stress. This process triggers the unfolded protein response (UPR), which is crucial for cellular homeostasis and can lead to apoptosis in cancer cells .
  • Disruption of Lipid Membranes : Research indicates that this compound interacts with lipid bilayers in cellular organelles, causing lipid bilayer stress. This disruption affects mitochondrial respiration and transmembrane protein transport, contributing to its anticancer effects .
  • Inhibition of Signaling Pathways : this compound has been shown to suppress the Akt signaling pathway, which is vital for cell survival and metabolism. It also inhibits multiple members of the protein kinase-like superfamily, impacting various biological processes associated with carcinogenesis and metastasis .

Clinical Applications

This compound's anticancer potential has been evaluated in several clinical settings:

  • Multiple Myeloma : In a phase I trial (SAKK 65/08), this compound demonstrated significant activity against multiple myeloma (MM), particularly in patients who were refractory to proteasome inhibitors. The combination of this compound with bortezomib and dexamethasone yielded an overall response rate of 65% in heavily pretreated patients .
  • Broad Anticancer Activity : this compound has shown broad anticancer activity across various preclinical models. Its ability to induce apoptosis and cell cycle arrest positions it as a promising candidate for further investigation in cancer therapy .

Research Findings

Recent studies have elucidated the biological activity of this compound through various experimental approaches:

Table 1: Summary of Key Studies on this compound

StudyFocusFindings
SAKK 65/08Phase I TrialInduced UPR; significant proteasome inhibition; promising activity in MM patients
CRISPR/Cas9 ScreeningMechanistic StudyIdentified lipid bilayer interactions; highlighted metabolic rewiring as a mechanism
Kinase Activity AssaysOff-Target EffectsInhibited multiple kinases; linked to suppression of cancer cell proliferation

Case Studies

  • Case Study: this compound in Multiple Myeloma
    • A patient with advanced MM received this compound as part of a combination therapy. The treatment resulted in a partial response, highlighting this compound's potential as an effective chemotherapeutic agent in this setting.
  • Case Study: Anticancer Mechanisms
    • In vitro studies demonstrated that this compound could induce apoptosis in various cancer cell lines by activating ER stress pathways and disrupting mitochondrial function, suggesting a multifaceted approach to cancer treatment.

Q & A

Basic Research Questions

Q. What experimental models are commonly used to evaluate nelfinavir's anticancer efficacy, and how do they inform mechanistic insights?

  • Methodological Answer : Preclinical studies often use in vitro cancer cell lines (e.g., SCLC, breast cancer) and in vivo patient-derived xenograft (PDX) models. For example:

  • Cell viability assays (MTT, flow cytometry) assess apoptosis via Annexin V/PI staining (e.g., MDA-MB231, MCF-7) .
  • Western blotting evaluates biomarkers like Bak, cytochrome c, and caspases to confirm apoptosis .
  • PDX models validate tumor regression and molecular pathways (e.g., mTOR inhibition, UPR induction) in SCLC .

Q. How is this compound quantified in pharmacokinetic studies, and what analytical methods ensure accuracy?

  • Methodological Answer : UV-Visible spectrophotometry (e.g., λ = 210–310 nm) with validation parameters:

  • Linearity : 10–60 µg/ml for this compound (R² > 0.999) .
  • Calibration : Equations like y=0.013x+0.029y = 0.013x + 0.029 are derived via least squares regression .
    LC-MS/MS is preferred for plasma metabolite quantification (e.g., M8 levels: 0.55–1.96 µM) .

Q. What is the role of this compound's active metabolite M8 in antiviral and anticancer activity?

  • Methodological Answer :

  • CYP2C19 metabolism : Generates M8, which retains anti-HIV activity (EC₅₀: 34 nM vs. This compound’s 30 nM) and binds PXR competitively .
  • Docking simulations : M8 shows distinct binding poses in PXR’s ligand-binding pocket (LBP), influencing receptor antagonism .

Advanced Research Questions

Q. How does this compound modulate oxidative stress to induce cancer cell death, and what experimental approaches validate this?

  • Methodological Answer :

  • ROS assays : H₂DCF-DA staining quantifies ROS accumulation (e.g., 2–3-fold increase in MDA-MB231 cells) .
  • Lipid peroxidation : MDA levels (nM) correlate with this compound-induced oxidative damage .
  • Akt pathway disruption : ROS-dependent degradation of Akt-HSP90 complexes, validated via immunoprecipitation .

Q. What computational methods predict this compound’s off-target kinase interactions, and how do they align with experimental data?

  • Methodological Answer :

  • MM/GBSA free energy calculations : Predict binding affinities for EGFR (ΔG = −50 kcal/mol) but not FGFR/EPHB4 .
  • Molecular docking : Identifies ATP-binding site interactions (e.g., EGFR vs. lapatinib) .
    Discrepancies arise for Akt2/CDK2, where computational predictions lack experimental validation .

Q. How do pharmacogenomic variants influence this compound’s plasma exposure and clinical outcomes?

  • Methodological Answer :

  • CYP2B6 516G→T : Correlates with 30% higher efavirenz exposure (p < 0.01) .
  • CYP2C19 681G→A : Reduces this compound clearance, linked to 40% lower virologic failure risk (p = 0.039) .
  • MDR1 3435 TT genotype : Associated with reduced resistance emergence in HIV trials (OR = 0.6) .

Q. What mechanisms underlie this compound’s radiosensitizing effects, and how are they tested in combination therapies?

  • Methodological Answer :

  • HIF-1α/VEGF suppression : Western blotting shows this compound reduces HIF-1α by 70% under hypoxia, validated via EF5 hypoxia marker assays .
  • In vivo xenografts : Tumor regrowth delay (2–3 weeks) with this compound + radiation vs. radiation alone .
  • Synergy with cisplatin : PPP2R1A silencing enhances apoptosis (p < 0.001) in LUAD models .

Q. Methodological Considerations

Q. How are contradictions in this compound’s efficacy across cancer cell lines addressed experimentally?

  • Answer :

  • Cell line stratification : Compare genetic profiles (e.g., H69 SCLC cells with PIK3CA mutations resist mTOR inhibition) .
  • Biomarker panels : Use ATF4, CHOP, and SESN2 to differentiate UPR vs. mTOR-driven responses .
  • Pharmacological manipulation : Co-treatment with rapamycin/tunicamycin isolates pathway-specific effects .

Q. What in silico and in vitro assays resolve this compound’s nuclear receptor agonism/antagonism?

  • Answer :

  • Luciferase reporter assays : HepG2 cells transfected with PXR/CAR show partial agonism (2-fold induction) and competitive antagonism (IC₅₀ = 10 µM) .
  • Limited proteolysis : PXR-LBD structural changes confirm ligand binding (30–250 µM this compound) .
  • AlphaSphere analysis : Identifies alternative binding sites (e.g., 1M13, 2O9I) via docking simulations .

Properties

IUPAC Name

(3S,4aS,8aS)-N-tert-butyl-2-[(2R,3R)-2-hydroxy-3-[(3-hydroxy-2-methylbenzoyl)amino]-4-phenylsulfanylbutyl]-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinoline-3-carboxamide
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

InChI

InChI=1S/C32H45N3O4S/c1-21-25(15-10-16-28(21)36)30(38)33-26(20-40-24-13-6-5-7-14-24)29(37)19-35-18-23-12-9-8-11-22(23)17-27(35)31(39)34-32(2,3)4/h5-7,10,13-16,22-23,26-27,29,36-37H,8-9,11-12,17-20H2,1-4H3,(H,33,38)(H,34,39)/t22-,23+,26-,27-,29+/m0/s1
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

InChI Key

QAGYKUNXZHXKMR-HKWSIXNMSA-N
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

Canonical SMILES

CC1=C(C=CC=C1O)C(=O)NC(CSC2=CC=CC=C2)C(CN3CC4CCCCC4CC3C(=O)NC(C)(C)C)O
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

Isomeric SMILES

CC1=C(C=CC=C1O)C(=O)N[C@@H](CSC2=CC=CC=C2)[C@@H](CN3C[C@H]4CCCC[C@H]4C[C@H]3C(=O)NC(C)(C)C)O
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

Molecular Formula

C32H45N3O4S
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

Related CAS

159989-65-8 (monomethane sulfonate (salt))
Record name Nelfinavir [INN:BAN]
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DSSTOX Substance ID

DTXSID5035080
Record name Nelfinavir
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Molecular Weight

567.8 g/mol
Source PubChem
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Physical Description

Solid
Record name Nelfinavir
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Solubility

Slightly soluble, 1.91e-03 g/L
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Mechanism of Action

HIV viral protease is an important enzyme for HIV maturation and pathogenicity since HIV produces its structural and key proteins in the form of a polyprotein that needs to be cleaved by a protease. HIV protease is synthesized as part of the Gag-pol polyprotein, where Gag encodes for the capsid and matrix protein to form the outer protein shell, and Pol encodes for the reverse transcriptase and integrase protein to synthesize and incorporate its genome into host cells. The Gag-pol polyprotein undergoes proteolytic cleavage by HIV protease to produce 66 molecular species which will assume conformational changes to become fully active. Inhibition of protease, therefore, prevents HIV virion from fully maturing and becoming infective. Nelfinavir is a competitive inhibitor of the HIV protease by reversibly binding to the active site of the enzyme, preventing it from interacting with its substrate to produce mature and infectious viral particles.
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CAS No.

159989-64-7
Record name Nelfinavir
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Record name NELFINAVIR
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Melting Point

349.84 °C
Record name Nelfinavir
Source DrugBank
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Record name Nelfinavir
Source Human Metabolome Database (HMDB)
URL http://www.hmdb.ca/metabolites/HMDB0014365
Description The Human Metabolome Database (HMDB) is a freely available electronic database containing detailed information about small molecule metabolites found in the human body.
Explanation HMDB is offered to the public as a freely available resource. Use and re-distribution of the data, in whole or in part, for commercial purposes requires explicit permission of the authors and explicit acknowledgment of the source material (HMDB) and the original publication (see the HMDB citing page). We ask that users who download significant portions of the database cite the HMDB paper in any resulting publications.

Retrosynthesis Analysis

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Strategy Settings

Precursor scoring Relevance Heuristic
Min. plausibility 0.01
Model Template_relevance
Template Set Pistachio/Bkms_metabolic/Pistachio_ringbreaker/Reaxys/Reaxys_biocatalysis
Top-N result to add to graph 6

Feasible Synthetic Routes

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