molecular formula C27H22Cl2N4 B1669197 Clofazimine CAS No. 2030-63-9

Clofazimine

Cat. No.: B1669197
CAS No.: 2030-63-9
M. Wt: 473.4 g/mol
InChI Key: WDQPAMHFFCXSNU-UHFFFAOYSA-N
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Mechanism of Action

Target of Action

Clofazimine primarily targets Mycobacterium leprae , the bacterium responsible for leprosy . It is believed to act on the bacterial outer membrane, the bacterial respiratory chain, and ion transporters . It also has anti-inflammatory properties due to its suppression of T-lymphocyte activity .

Mode of Action

This compound exerts a slow bactericidal effect on Mycobacterium leprae due to its action on the bacterial outer membrane . It is also suggested that it interferes with DNA . The anti-inflammatory activity of this compound is the result of its inhibition of T-lymphocyte activation and proliferation . Several mechanisms have been proposed, including direct antagonism of T-cell Kv 1.3 potassium channels and indirect action by promoting the release of E-series prostaglandins and reactive oxygen species .

Biochemical Pathways

It is known to interfere with cellular respiration and ion transport in mycobacterium leprae . An in vitro study identified eight metabolites of this compound and the enzymatic pathways involved in their formation, including the important cytochrome P450 isoenzymes CYP3A4/A5 and CYP1A2 .

Pharmacokinetics

This compound is a highly lipophilic antimicrobial, which allows it to accumulate in skin and nerves . It has a relatively long duration of action owing to its long residence time in the body . The pharmacokinetics of this compound were well characterized by a three-compartment model, with a clearance of 11.5 L/h and peripheral volume of 10,500 L for a typical participant . Lower plasma exposures were observed in women during the first few months of treatment, explained by higher body fat fraction .

Result of Action

The bactericidal effect of this compound results in the elimination of Mycobacterium leprae from the body . Its anti-inflammatory properties help control harmful erythema nodosum leprosum and reversal immunity reactions, which may complicate antimicrobial chemotherapy .

Action Environment

The action of this compound can be influenced by environmental factors. For instance, its lipophilic nature allows it to accumulate in fatty tissues, which can affect its distribution and efficacy . Furthermore, its pharmacokinetics and resulting efficacy can be influenced by the patient’s body fat content .

Biochemical Analysis

Biochemical Properties

Clofazimine exerts a slow bactericidal effect on Mycobacterium leprae due to its action on the bacterial outer membrane . There is also evidence that it affects the bacterial respiratory chain and ion transporters . This compound is at least partially metabolized in the liver . An in vitro study using human liver microsomes identified eight metabolites of this compound and the enzymatic pathways involved in their formation, including the important cytochrome P450 isoenzymes CYP3A4/A5 and CYP1A2 .

Cellular Effects

This compound has been found to modulate the expression of lipid metabolism proteins in Mycobacterium leprae-infected macrophages . It also exerts anti-inflammatory properties due to the suppression of T-lymphocyte activity . In HepaRG cells, this compound was a weak inducer of CYP3A4 at low concentrations, but inhibited CYP3A4 at therapeutic concentrations .

Molecular Mechanism

This compound works by binding to the guanine bases of bacterial DNA, thereby blocking the template function of the DNA and inhibiting bacterial proliferation . It also increases the activity of bacterial phospholipase A2, leading to the release and accumulation of lysophospholipids, which are toxic and inhibit bacterial proliferation .

Temporal Effects in Laboratory Settings

In a study of patients with severe Mycobacterium avium complex pulmonary disease (MAC-PD), this compound demonstrated a relatively favorable efficacy, regardless of the maintenance dose . This effect was more pronounced when administered for a duration exceeding 6 months . In mice receiving this compound, the lungs’ bacterial load continued to grow during the first seven days of treatment .

Dosage Effects in Animal Models

In an orthotopic melanoma mouse model, this compound reduced tumor size by 90% . The specific effects of different dosages of this compound in animal models have not been extensively studied.

Metabolic Pathways

This compound is involved in several metabolic pathways. It has been found to modulate the expression of lipid metabolism proteins in Mycobacterium leprae-infected macrophages . It also affects the bacterial respiratory chain and ion transporters .

Transport and Distribution

This compound is a potential substrate of uptake and efflux transporters that might be involved in its disposition . The intracellular concentrations of this compound were significantly increased in the presence of selective inhibitors of P-gp and BCRP .

Subcellular Localization

This compound has been found to accumulate in macrophages in an intracellular liquid crystal-like structure This suggests that this compound may be localized in specific subcellular compartments within these cells

Preparation Methods

Synthetic Routes and Reaction Conditions: Clofazimine is synthesized through a multi-step process involving the condensation of 3-chloro-4-nitroaniline with 4-chlorobenzaldehyde to form a Schiff base. This intermediate is then cyclized to form the phenazine core structure. The final step involves the reduction of the nitro group to an amine .

Industrial Production Methods: Industrial production of this compound involves high-pressure homogenization to produce nanosuspensions suitable for intravenous use. This method ensures that the particle size is appropriate for passive targeting to the reticuloendothelial system .

Scientific Research Applications

Clofazimine is a riminophenazine dye with a history of use in treating various diseases, including leprosy, tuberculosis, and infections caused by mycobacteria . Recent studies have also explored its potential in treating other conditions, such as Huntington's disease and viral infections .

Scientific Research Applications

Antimicrobial Applications

  • Leprosy: this compound is approved by the FDA for leprosy treatment . The National Hansen’s Disease Program (NHDP) uses this compound as part of a treatment protocol for multibacillary leprosy .
  • Tuberculosis: this compound was initially developed as an anti-tuberculosis treatment . It has been re-purposed to treat multidrug-resistant tuberculosis (MDR-TB) and extensively drug-resistant TB (XDR-TB) .
  • Nontuberculous Mycobacterial Infections: this compound is used in combination with other antimicrobials to treat Mycobacterium avium complex (MAC) and is considered a promising drug for treating nontuberculous mycobacterial pulmonary disease .

Antiviral Applications

  • Coronaviruses: this compound has demonstrated inhibitory activity against coronaviruses, including SARS-CoV-2 and MERS-CoV . It inhibits cell fusion mediated by the viral spike glycoprotein and the viral helicase activity. In a hamster model of SARS-CoV-2, this compound reduced viral loads in the lung and viral shedding in feces and alleviated inflammation associated with viral infection .
  • COVID-19: this compound, combined with remdesivir, shows antiviral synergy in vitro and in vivo and restricts viral shedding from the upper respiratory tract . It is considered an attractive clinical candidate for treating outpatients and, when combined with remdesivir, hospitalized patients with COVID-19 .

Other Applications

  • Huntington's Disease: this compound may be effective in treating Huntington’s disease by reducing the toxicity of polyQ proteins and restoring mitochondrial function .
  • Anti-inflammatory Properties: this compound has been used or investigated for use in neutrophilic dermatoses, severe pyoderma gangrenosa, disseminated granuloma annulare, idiopathic panniculitis nodularis, autoimmune diseases, and lymphocytic dermatoses such as discoid lupus erythematosus .
  • Anticancer Properties: this compound has shown anticancer properties in vitro and in vivo, with its activity as a specific inhibitor of the oncogenic Wnt signaling pathway emerging as a promising targeting mechanism against breast, colon, liver, and other forms of cancer .

Research Findings

  • Antiviral Mechanism: Transcriptional analysis revealed that this compound treatment could reverse transcriptomic changes induced by SARS-CoV-2 infection and prime innate-immunity-related pathways .
  • In vivo Efficacy: Studies using a hamster model showed that this compound reduces body weight loss after SARS-CoV-2 infection, decreases virus plaque-forming units in lung tissues, and lowers viral loads in feces .
  • Drug Repositioning: this compound's journey from an anti-tuberculosis treatment to a leprosy drug and its subsequent repositioning for other infections and conditions exemplifies drug repurposing in modern pharmacology .

Case Studies

Due to the limitations of the provided search results, comprehensive case studies are not available. However, the following points highlight the clinical use and study of this compound in specific contexts:

  • Expanded Access Programs: Real-world data collection from expanded access case studies has been conducted for treating nontuberculous mycobacterial infections with this compound .
  • MDR-TB Treatment: this compound's efficacy has been demonstrated as part of a shorter regimen for MDR-TB .
  • MAC Pulmonary Disease: A study involving 170 patients with severe MAC-PD, treated with regimens containing this compound, suggests it as a promising drug .

Comparison with Similar Compounds

    Dapsone: Another antimicrobial agent used in the treatment of leprosy.

    Rifampin: Used in combination with clofazimine for the treatment of leprosy and tuberculosis.

Uniqueness of this compound: this compound is unique due to its dual antimicrobial and anti-inflammatory properties, as well as its ability to accumulate in skin and nerves, making it particularly effective in treating leprosy .

Biological Activity

Clofazimine, a riminophenazine dye, was originally developed for the treatment of leprosy and has since gained recognition for its efficacy against multidrug-resistant tuberculosis (MDR-TB) and other mycobacterial infections. This article delves into the biological activity of this compound, highlighting its pharmacokinetics, antimicrobial properties, and clinical outcomes based on diverse research findings.

Pharmacokinetics

This compound exhibits unique pharmacokinetic properties characterized by its long half-life , which can extend from weeks to months depending on the duration of administration. The drug accumulates in tissues, achieving concentrations sometimes up to milligrams per gram, while serum levels remain relatively low and steady. This accumulation allows for sustained antimicrobial activity even after treatment cessation, with significant declines in colony-forming unit (CFU) counts observed in various studies .

Table 1: Pharmacokinetic Parameters of this compound

ParameterValue
Half-lifeWeeks to months
Tissue concentrationUp to mg/g
Serum concentration~1.0 µg/ml (at 25 mg/kg)

Antimicrobial Activity

This compound demonstrates delayed antimicrobial activity against Mycobacterium tuberculosis both in vitro and in vivo. Studies have shown that it significantly reduces CFU counts in the lungs and spleens of infected mice. For instance, a study reported a decline of 2.4 log CFU in lungs after 8 weeks of treatment with this compound alone . Additionally, when combined with other anti-TB drugs, this compound enhances overall treatment efficacy.

Case Study: Efficacy Against Non-Tuberculous Mycobacteria (NTM)

A recent study involving 170 patients with severe Mycobacterium avium complex pulmonary disease (MAC-PD) treated with this compound-containing regimens revealed promising results. The microbiological cure rate reached 71% when this compound was administered for 6-12 months , compared to just 23% for those treated for less than 6 months . This underscores the importance of treatment duration in achieving successful outcomes.

Clinical Outcomes

This compound's clinical effectiveness has been evaluated through various cohort studies. A systematic review indicated that approximately 65% of patients treated with this compound-containing regimens experienced favorable outcomes, such as cure or treatment completion . Notably, it has shown effectiveness even in cases of extensively drug-resistant tuberculosis (XDR-TB), although higher mortality rates have been observed compared to other treatments .

Table 2: Treatment Outcomes in this compound Studies

Study TypeTotal PatientsCulture Conversion (%)Microbiological Cure (%)
Cohort Study on MAC-PD17045.354.6
Systematic Review (MDR-TB)VariousN/A65

Side Effects and Safety Profile

This compound is generally well-tolerated; however, it is associated with certain side effects such as gastrointestinal complaints and skin hyperpigmentation. In one analysis, only 11.4% of patients reported adverse events related to this compound, leading to discontinuation in less than 1% of cases . This safety profile is crucial for long-term treatments often required for MDR-TB.

Properties

IUPAC Name

N,5-bis(4-chlorophenyl)-3-propan-2-yliminophenazin-2-amine
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

InChI

InChI=1S/C27H22Cl2N4/c1-17(2)30-24-16-27-25(15-23(24)31-20-11-7-18(28)8-12-20)32-22-5-3-4-6-26(22)33(27)21-13-9-19(29)10-14-21/h3-17,31H,1-2H3
Source PubChem
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Description Data deposited in or computed by PubChem

InChI Key

WDQPAMHFFCXSNU-UHFFFAOYSA-N
Source PubChem
URL https://pubchem.ncbi.nlm.nih.gov
Description Data deposited in or computed by PubChem

Canonical SMILES

CC(C)N=C1C=C2C(=NC3=CC=CC=C3N2C4=CC=C(C=C4)Cl)C=C1NC5=CC=C(C=C5)Cl
Source PubChem
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Molecular Formula

C27H22Cl2N4
Source PubChem
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DSSTOX Substance ID

DTXSID7022839
Record name Clofazimine
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Molecular Weight

473.4 g/mol
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Physical Description

Solid
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Solubility

0.3 [ug/mL] (The mean of the results at pH 7.4), 1.51e-03 g/L
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Mechanism of Action

Although the precise mechanism(s) of action of clofazimine have not been elucidated, its antimicrobial activity appears to be membrane-directed. It was previously thought that, due to its lipophilicity, clofazimine participated in the generation of intracellular reactive oxygen species (ROS) via redox cycling, specifically H2O2 and superoxide, which then exerted an antimicrobial effect. A more recent and compelling theory involves clofazimine interacting with bacterial membrane phospholipids to generate antimicrobial lysophospholipids - bactericidal efficacy may, then, arise from the combined membrane-destabilizing effects of both clofazimine and lysophospholipids, which interfere with K+ uptake and, ultimately, ATP production. The anti-inflammatory activity of clofazimine is the result of its inhibition of T-lymphocyte activation and proliferation. Several mechanisms have been proposed, including direct antagonism of T-cell Kv 1.3 potassium channels and indirect action by promoting the release of E-series prostaglandins and reactive oxygen species from bystander neutrophils and monocytes.
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CAS No.

2030-63-9
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Melting Point

210-212 °C, 210 - 212 °C
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Retrosynthesis Analysis

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Strategy Settings

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Min. plausibility 0.01
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Template Set Pistachio/Bkms_metabolic/Pistachio_ringbreaker/Reaxys/Reaxys_biocatalysis
Top-N result to add to graph 6

Feasible Synthetic Routes

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